Publications
Derek Tshiabuila, Wonderful Choga, James E. San, Tongai Maponga, Gert Van Zyl, Jennifer Giandhari, Sureshnee Pillay, Wolfgang Preiser, Yeshnee Naidoo, Cheryl Baxter, Darren P. Martin, Tulio de Oliveira
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable for Genomic Surveillance Within Clinical Diagnostic Settings
International Journal of Molecular Sciences, 25(21): 11702, 31 October 2024. doi:10.3390/ijms252111702.
Tulio de Oliveira
The third era of genomics is at risk of being dismantled across the global south
Science, vol 386, Issue 6718, 10 October 2024. doi:10.1126/science.adt4843
Christoffel Opperman, Janré Steyn, Megan Ceris Matthews, Sarishna Singh, Yonas Ghebrekristos, Tanya Jane Kerr, Michele Miller, Aliasgar Esmail, Helen Cox, Robin Warren, Giovanni Ghielmetti, Wynand J. Goosen
Targeted deep sequencing of mycobacteria species from extrapulmonary sites not identified by routine line probe assays: a retrospective laboratory analysis of stored clinical cultures
IJID Regions, Volume 13, 100464, December 2024 (available online 24 September 2024). doi.org/10.1016/j.ijregi.2024.100464
Isidore Nsengimana, John Juma, Kristina Roesel, Methode N. Gasana, Fabrice Ndayisenga, Claude M. Muvunyi, Emmanuel Hakizimana, Jean N. Hakizimana, Gillian Eastwood, Augustino A. Chengula, Bernard Bett, Christopher J. Kasanga, Samuel O. Oyola
Genomic epidemiology of Rift Valley Fever Virus involved in the 2018 and 2022 outbreaks in livestock in Rwanda
Viruses 16, no. 7: 1148, 17 July 2024. doi.org/10.3390/v16071148
Giovanni Ghielmetti, Tanya J. Kerr, Netanya Bernitz, Sinegugu K. Mhlophe, Elizma Streicher, Andre G. Loxton, Robin M. Warren, Michele A. Miller, Wynand J. Goosen
Insights into mycobacteriome composition in Mycobacterium bovis‑infected African buffalo (Syncerus caffer) tissue samples
Scientific Reports 14, 17537, 30 July 2024, doi: 10.1038/s41598-024-68189-x
Wynand J. Goosen, Sashen Moodley, Giovanni Ghielmetti, Yumna Moosa, Thando Zulu, Theresa Smit, Vukuzazi Team, Leanie Kleynhans, Tanya J. Kerr, Elizabeth M. Streicher, Willem A. Hanekom, Robin M. Warren, Emily B. Wong, Michele A. Miller
Identification and molecular characterization of Mycobacterium bovis DNA in GeneXpert® MTB/RIF ultra-positive, culture-negative sputum from a rural community in South Africa
One Health, 18, 100702, June 2024 (available online March 2024), doi: 10.1016/j.onehlt.2024.100702
Deborah M. Cooke, Charlene Clarke, Tanya J. Kerr, Robin M. Warren, Carmel Witte, Michele A. Miller, Wynand J. Goosen
Detection of Mycobacterium bovis in nasal swabs from communal goats (Capra hircus) in rural KwaZulu-Natal, South Africa
Frontiers in Microbiology, 15:1349163, 14 February 2024, doi: 10.3389/fmicb.2024.1349163